bamCoverage: generates a coverage bigWig file from a given BAM or CRAM file

toolshed.g2.bx.psu.edu/repos/bgruening/deeptools_bam_coverage/deeptools_bam_coverage/3.5.4+galaxy03.5.4+galaxy0

Metadata

Servers Offering this Tool

UseGalaxy.eu (3.5.4+galaxy0)

This is a guess, we are not currently checking if that is actually present.

Observed Tool Versions

Within GTN tutorials

3.5.4+galaxy0
3.5.1.0.0
3.3.2.0.0
3.3.0.0.0
2.5.1.1.0

EDAM Operations

EDAM Topics

Relevant Tutorials

Epigenetics / Identification of the binding sites of the Estrogen receptor
Epigenetics / Formation of the Super-Structures on the Inactive X
Genome Annotation / Essential genes detection with Transposon insertion sequencing
Transcriptomics / De novo transcriptome reconstruction with RNA-Seq
Visualisation / Ploting a Microbial Genome with Circos