bcftools consensus: Create consensus sequence by applying VCF variants to a reference fasta file
toolshed.g2.bx.psu.edu/repos/iuc/bcftools_consensus/bcftools_consensus/1.9+galaxy21.9+galaxy2
Metadata
Servers Offering this Tool
UseGalaxy.eu (1.9+galaxy2)This is a guess, we are not currently checking if that is actually present.
Observed Tool Versions
Within GTN tutorials
- 1.9+galaxy2
- 1.9+galaxy1
- 1.15.1+galaxy3
- 1.10
EDAM Operations
EDAM Topics
Relevant Tutorials
- Evolution / Identifying tuberculosis transmission links: from SNPs to transmission clusters
- Using Galaxy and Managing your Data / Automating Galaxy workflows using the command line
- Microbiome / Pathogen detection from (direct Nanopore) sequencing data using Galaxy - Foodborne Edition
- Variant Analysis / M. tuberculosis Variant Analysis