Plot: with scanpy

toolshed.g2.bx.psu.edu/repos/iuc/scanpy_plot/scanpy_plot/1.9.6+galaxy31.9.6+galaxy3

Metadata

Servers Offering this Tool

UseGalaxy.eu (1.9.6+galaxy3)

This is a guess, we are not currently checking if that is actually present.

Observed Tool Versions

Within GTN tutorials

1.9.6+galaxy3
1.7.1+galaxy1
1.7.1+galaxy0
1.10.2+galaxy0

EDAM Operations

operation_3223

EDAM Topics

Relevant Tutorials

Single Cell / Pre-processing of 10X Single-Cell ATAC-seq Datasets
Single Cell / Single-cell ATAC-seq standard processing with SnapATAC2
Single Cell / Filter, plot and explore single-cell RNA-seq data with Scanpy
Single Cell / Removing the effects of the cell cycle
Single Cell / Analysis of plant scRNA-Seq Data with Scanpy
Single Cell / Clustering 3K PBMCs with Scanpy