staramr: Scans genome assemblies against the ResFinder, PlasmidFinder, and PointFinder databases searching for AMR genes.
toolshed.g2.bx.psu.edu/repos/nml/staramr/staramr_search/0.7.1+galaxy20.7.1+galaxy2
Metadata
Servers Offering this Tool
UseGalaxy.eu (0.7.1+galaxy2)This is a guess, we are not currently checking if that is actually present.
Observed Tool Versions
Within GTN tutorials
- 0.7.1+galaxy2
- 0.5.1
- 0.10.0+galaxy1
EDAM Operations
EDAM Topics
Relevant Tutorials
- Genome Annotation / Identification of AMR genes in an assembled bacterial genome
- Microbiome / Antibiotic resistance detection