Epigenetics — Editorial Board Home

This is a new, experimental "Editorial Board Home" for a given topic. It is intended to provide a single place for maintainers and editorial board members to find out key information about their topic and identify action items.

Editorial Board

Florian Heyl Lucille Delisle Joachim Wolff Devon Ryan

Action Items

Item	Status	Why you should do this
Summary	Done ✅	Provide a sufficiently detailed summary of the topic to let learners know what they're learning about in this topic.
Sufficient Editorial Board Members	Done ✅ (4 members)	Having multiple people sharing the burden of being responsible for a specific topic can reduce board member burn-out in the long term.
Enable Subtopics	Pending ❌	Subtopics help organize the content and make it easier to navigate.
Annotate Funders	Done ✅ (4 funders)	By annotating the funders of your topic's materials, you make it easier to write your grant reports later
Learning Pathway CTA	Pending ❌	By providing a Learning Pathway CTA, we can help guide learners to the best resources for learning about this topic.

Topic Materials

Material	Contributions v2 help	Pre-requisites help	Follow up trainings	Data on Zenodo	Notebook	Server Compatibility
ATAC-Seq data analysis	❌	❌	❌	✅	❌	View
CUT&RUN data analysis	✅	❌	❌	✅	❌	View
DNA Methylation data analysis	❌	❌	❌	✅	❌	View
Formation of the Super-Structures on the Inactive X	❌	❌	❌	✅	❌	View
Hi-C analysis of Drosophila melanogaster cells using HiCExplorer	✅	❌	❌	✅	❌	View
Identification of the binding sites of the Estrogen receptor	❌	❌	❌	✅	❌	View
Identification of the binding sites of the T-cell acute lymphocytic leukemia protein 1 (TAL1)	❌	✅	❌	✅	❌	View
Infinium Human Methylation BeadChip	✅	❌	❌	✅	❌	View
Introduction to ChIP-Seq data analysis	❌	❌	❌	✅	❌	View
Introduction to DNA Methylation data analysis	❌	❌	❌	✅	❌	View

Topic Workflows

Material	Workflow	Updated	Version	Tests	Reports	Comments
ATAC-Seq data analysis	ATAC-seq GTM	Dec 23, 2024	10	❌	❌	❌
CUT&RUN data analysis	ATAC-seq GTM	Dec 23, 2024	1	❌	❌	❌
DNA Methylation data analysis	Workflow Methylation Seq	Dec 23, 2024	3	✅	❌	❌
Formation of the Super-Structures on the Inactive X	GTN - ChIP Seq - Formation Of Super Structures On Xi	Dec 23, 2024	5	✅	❌	❌
Hi-C analysis of Drosophila melanogaster cells using HiCExplorer	Galaxy Workflow Galaxy Hi C	Dec 23, 2024	4	❌	❌	❌
Identification of the binding sites of the Estrogen receptor	Identification Of The Binding Sites Of The Estrogen Receptor - Chip Seq	Dec 23, 2024	4	❌	❌	❌
Identification of the binding sites of the Estrogen receptor	Identification Of The Binding Sites Of The Estrogen Receptor - Qc Mapping	Dec 23, 2024	4	❌	❌	❌
Identification of the binding sites of the T-cell acute lymphocytic leukemia protein 1 (TAL1)	Identification of the binding sites of the T-cell acute lymphocytic leukemia protein 1 (TAL1)	Dec 23, 2024	1	✅	❌	❌
Infinium Human Methylation BeadChip	Infinium Human Methylation BeadChip	Dec 23, 2024	1	✅	❌	❌

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TODO once this is merged: https://github.com/galaxyproject/training-material/pull/4963

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