Every 3 months we organise one day dedicated to the GTN community! Thursday, May 20th is the next GTN CoFest. We will be working on the training materials, have discussions with the global Galaxy traning community. Do you teach with Galaxy? Want to learn how to add your tutorial to the GTN? New to the community and just want to learn more? Everybody is welcome!
Full StoryMaria Doyle
Contributions
The following list includes only slides and tutorials where the individual has been added to the contributor list. This may not include the sum total of their contributions to the training materials (e.g. GTN css or design, tutorial datasets, workflow development, etc.) unless described by a news post.
GitHub Activity
Editorial Roles
This contributor has taken on additional responsibilities as an editor for the following topics. They are responsible for ensuring that the content is up to date, accurate, and follows GTN best practices.
Tutorials
- Genome Annotation / CRISPR screen analysis
- Transcriptomics / 2: RNA-seq counts to genes
- Transcriptomics / 3: RNA-seq genes to pathways
- Transcriptomics / Visualization of RNA-Seq results with heatmap2
- Transcriptomics / 1: RNA-Seq reads to counts
- Transcriptomics / Visualization of RNA-Seq results with Volcano Plot
- Transcriptomics / GO Enrichment Analysis
- Transcriptomics / Reference-based RNA-Seq data analysis ✍️
- Transcriptomics / Visualization of RNA-Seq results with Volcano Plot in R
- Epigenetics / ATAC-Seq data analysis
- Sequence analysis / Quality Control
Slides
- Genome Annotation / Introduction to CRISPR screen analysis
- Using Galaxy and Managing your Data / Getting data into Galaxy
Video Recordings
- Genome Annotation / Introduction to CRISPR screen analysis 💬
- Genome Annotation / CRISPR screen analysis 💬 🗣
- Transcriptomics / Visualization of RNA-Seq results with Volcano Plot 💬 🗣
- Transcriptomics / Visualization of RNA-Seq results with Volcano Plot in R 💬 🗣
News
Author(s) | Maria Doyle |
The Volcano plot tutorial introduced volcano plots and showed how they can be easily generated with the Galaxy Volcano plot tool. This new tutorial shows how you can customise a plot using the R script output from the tool and RStudio in Galaxy. A short video for the tutorial is also available on YouTube, created for the GCC2021 Training week. Happy plotting!
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