Admin Training Course
purlPURL: https://gxy.io/GTN:P00000Comment: What is a Learning Pathway?We recommend you follow the tutorials in the order presented on this page. They have been selected to fit together and build up your knowledge step by step. If a lesson has both slides and a tutorial, we recommend you start with the slides, then proceed with the tutorial.
Learn how to setup, configure, and maintain your own Galaxy server. This learning pathway will guide you through all the steps required to setup your own Galaxy server with Ansible, configuring it, and making it production ready.
This learning path covers all the topics usually taught during the regular 5-day admin training workshops. Each module represents what is usually roughly taught in one day during the events.
Monday: Setting up Galaxy with Ansible
This module covers getting a Galaxy server setup with Ansible, a server you will develop furhter in the rest of the modules
Lesson | Slides | Hands-on | Recordings |
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Galaxy from an administrator's point of view
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Ansible | |||
Galaxy Installation with Ansible |
Tuesday: Making the server useful
Here we pivot to focus on making our server useful; adding tools and data, configuring quotas and authentication
Wednesday: Clusters
Lesson | Slides | Hands-on | Recordings |
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Connecting Galaxy to a compute cluster | |||
job_conf.xml external-link
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Mapping Jobs to Destinations using TPV | |||
Running Jobs on Remote Resources with Pulsar |
Thursday: Expanding
Friday: Grab bag
Here we have some additional topics, some of which are not admin related. Please feel free to pick and choose the tutorials that are interesting for you.
Lesson | Slides | Hands-on | Recordings |
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Galaxy Troubleshooting
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Tool development and integration into Galaxy
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Multisample Analysis | |||
Rule Based Uploader | |||
Creating a new tutorial
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Galaxy Interactive Tools |
Editorial Board
This material is reviewed by our Editorial Board:
Helena Rasche Nate Coraor Simon Gladman